Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	drebrin 1
ENST00000309007	DBN1-001	ENSG00000113758	9606	-	5:177456608-177473741	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000309007	8.570±0.00	7.535±0.00	3.916±2.23	8.082±0.00	0.723±0.00	2.648±0.00	7.571±0.00	1.701±1.48	3.097±2.17	1.205±0.00	23.148±13.69	2.159±0.00	6.426±3.09

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008A2	CIL_0008A2_0001	VISTA	5:177089375-177692188
CIL_0000XB	CIL_0000XB_0002	CGP	5:177446445-177474401
CIL_0002YE	CIL_0002YE_0001	CGP	5:177456608-177497606

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003779	IEA:NAS	actin binding
GO:0005515	IPI	protein binding
GO:0005522	ISS	profilin binding
GO:0005622	IEA	intracellular
GO:0005737	NAS	cytoplasm
GO:0007015	IEA:ISS	actin filament organization
GO:0015629	ISS	actin cytoskeleton
GO:0030425	NAS	dendrite
GO:0042641	NAS	actomyosin
GO:0048168	NAS	regulation of neuronal synaptic plasticity
GO:0050773	NAS	regulation of dendrite development

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000109923	Dbn1-002	protein_coding	Mus_musculus	0	2929
ENSMUST00000109921	Dbn1-009	protein_coding	Mus_musculus	0	2388
ENSMUST00000021950	Dbn1-001	protein_coding	Mus_musculus	0	1570
ENSMUST00000135705	Dbn1-003	retained_intron	Mus_musculus	0	1288
ENSMUST00000139275	Dbn1-005	protein_coding	Mus_musculus	0	747
ENSMUST00000124480	Dbn1-006	processed_transcript	Mus_musculus	0	592
ENSMUST00000139516	Dbn1-008	retained_intron	Mus_musculus	0	364
ENSMUST00000127867	Dbn1-007	retained_intron	Mus_musculus	0	326
ENSMUST00000175813	Dbn1-010	retained_intron	Mus_musculus	0	237

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