C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: drebrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021950 Dbn1-001 ENSMUSG00000034675 10090 - 13:55473429-55488111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainENSMUST00000021950
Transcript ID Bladder Brain
ENSMUST00000021950 2.377±0.00 18.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0000XB CIL_0000XB_0003 CGP 13:55464267-55488111
CIL_0002YE CIL_0002YE_0002 CGP 13:55473429-55513676

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005522 ISS profilin binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005921 IDA gap junction
GO:0007015 IDA actin filament organization
GO:0007399 IEA nervous system development
GO:0010643 IMP cell communication by chemical coupling
GO:0010644 IMP cell communication by electrical coupling
GO:0015629 IDA actin cytoskeleton
GO:0016020 IDA membrane
GO:0032507 IMP maintenance of protein location in cell
GO:0048699 IEP generation of neurons
GO:0061351 IEP neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292385 DBN1-002 protein_coding Homo_sapiens 0 1387
ENST00000309007 DBN1-001 protein_coding Homo_sapiens 0 1570
ENST00000393565 DBN1-004 protein_coding Homo_sapiens 0 2904
ENST00000467054 DBN1-012 retained_intron Homo_sapiens 0 457
ENST00000471767 DBN1-007 retained_intron Homo_sapiens 0 427
ENST00000472831 DBN1-003 retained_intron Homo_sapiens 0 1375
ENST00000477391 DBN1-009 protein_coding Homo_sapiens 0 1240
ENST00000505550 DBN1-010 retained_intron Homo_sapiens 0 324
ENST00000506117 DBN1-011 protein_coding Homo_sapiens 0 435
ENST00000512501 DBN1-006 protein_coding Homo_sapiens 0 630
ENST00000514833 DBN1-008 protein_coding Homo_sapiens 0 501

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