C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: drebrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139275 Dbn1-005 ENSMUSG00000034675 10090 - 13:55481550-55487633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000139275
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000139275 53.597±0.00 27.250±0.00 10.602±0.00 28.256±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0000XB CIL_0000XB_0003 CGP 13:55464267-55488111
CIL_0002YE CIL_0002YE_0002 CGP 13:55473429-55513676

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0005921 IDA gap junction
GO:0007015 IDA actin filament organization
GO:0010643 IMP cell communication by chemical coupling
GO:0010644 IMP cell communication by electrical coupling
GO:0015629 IDA actin cytoskeleton
GO:0016020 IDA membrane
GO:0032507 IMP maintenance of protein location in cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292385 DBN1-002 protein_coding Homo_sapiens 0 749
ENST00000309007 DBN1-001 protein_coding Homo_sapiens 0 747
ENST00000393565 DBN1-004 protein_coding Homo_sapiens 0 747
ENST00000471767 DBN1-007 retained_intron Homo_sapiens 0 409
ENST00000472831 DBN1-003 retained_intron Homo_sapiens 0 435
ENST00000477391 DBN1-009 protein_coding Homo_sapiens 0 726
ENST00000506117 DBN1-011 protein_coding Homo_sapiens 0 435
ENST00000514833 DBN1-008 protein_coding Homo_sapiens 0 359

Loading