C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SMG1 pseudogene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000309865  |
SMG1P1-001 |
ENSG00000237296 |
9606 | + |
16:22437401-22491826  |
transcribed_unprocessed_pseudogene |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006GX | CIL_0006GX_0001 | CGP | 16:22297375-22437165 |
| CIL_0008RG | CIL_0008RG_0001 | VISTA | 16:22372801-22973961 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000032891
|
Smg1-001 | protein_coding | Mus_musculus | 0 | 5216 |
|
ENSMUST00000179331
|
Smg1-005 | protein_coding | Mus_musculus | 0 | 4615 |
|
ENSMUST00000180009
|
Smg1-003 | retained_intron | Mus_musculus | 0 | 1768 |
|
ENSMUST00000179047
|
Smg1-002 | protein_coding | Mus_musculus | 0 | 1384 |
|
ENSMUST00000179847
|
Smg1-004 | retained_intron | Mus_musculus | 0 | 1110 |
