C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314594 R3HCC1L-201 ENSG00000166024 9606 + 10:98163287-98244894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314594
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314594 1.252±0.00 1.000±0.00 0.775±0.19 1.506±0.64 0.549±0.00 2.073±0.00 0.530±0.00 2.583±0.83 0.684±0.00 1.050±0.55 0.706±0.14 5.565±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BX CIL_0001BX_0002 CGP 10:97865000-98244897
CIL_00054Z CIL_00054Z_0001 CGP 10:98134624-98268250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0035145 IDA exon-exon junction complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026188 R3hcc1l-001 protein_coding Mus_musculus 0 1399
ENSMUST00000160107 R3hcc1l-003 protein_coding Mus_musculus 0 767
ENSMUST00000162238 R3hcc1l-002 retained_intron Mus_musculus 0 327
ENSMUST00000161422 R3hcc1l-005 retained_intron Mus_musculus 0 292

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