C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026188 R3hcc1l-001 ENSMUSG00000025184 10090 + 19:42518759-42592343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026188 2.573±0.21 0.750±0.31 4.417±0.06 2.162±0.93 2.470±0.26 1.258±0.40 1.410±0.19 1.977±0.35 2.593±1.27 3.081±0.65 1.816±0.20 2.994±0.81 3.519±1.20 2.673±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BX CIL_0001BX_0003 CGP 19:42283037-42592343
CIL_00054Z CIL_00054Z_0002 CGP 19:42518759-42612813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0035145 ISS exon-exon junction complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298999 R3HCC1L-001 protein_coding Homo_sapiens 0 1399
ENST00000314594 R3HCC1L-201 protein_coding Homo_sapiens 0 1399
ENST00000370584 R3HCC1L-202 protein_coding Homo_sapiens 0 1399
ENST00000370586 R3HCC1L-002 protein_coding Homo_sapiens 0 767
ENST00000612478 R3HCC1L-203 protein_coding Homo_sapiens 0 769
ENST00000613938 R3HCC1L-204 protein_coding Homo_sapiens 0 767

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