C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spindle and kinetochore associated complex subunit 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314759 SKA3-001 ENSG00000165480 9606 - 13:21153595-21176602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaTestisENST00000314759
Transcript ID Breast Ovary Placenta Testis
ENST00000314759 0.107±0.00 1.827±0.80 1.128±0.00 1.553±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SS CIL_0003SS_0001 CGP 13:21140514-21176602
CIL_0004MC CIL_0004MC_0001 CGP 13:21153595-21179084

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000940 IDA condensed chromosome outer kinetochore
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005876 IDA spindle microtubule
GO:0007059 IMP chromosome segregation
GO:0007067 IMP mitotic nuclear division
GO:0031110 IDA regulation of microtubule polymerization or depolymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022536 Ska3-201 protein_coding Mus_musculus 0 604

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