C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003SS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150459-ENSG00000165480 CGP 9606 13:21140514-21176602
GeneTranscriptPositionBiotype
ENSG00000150459 (SAP18)
Sin3A-associated protein, 18kDa 		ENST00000382533 (SAP18-001) 21140514-21149082 protein_coding
ENST00000450573 (SAP18-008) 21140774-21147319 protein_coding
ENST00000467636 (SAP18-005) 21140886-21147603 protein_coding
ENST00000471009 (SAP18-007) 21146464-21147391 processed_transcript
ENST00000485646 (SAP18-004) 21140612-21141619 processed_transcript
ENST00000492245 (SAP18-006) 21140615-21147413 protein_coding
ENST00000607003 (SAP18-009) 21140578-21149082 protein_coding
ENST00000621421 (SAP18-201) 21140514-21149084 protein_coding
ENSG00000165480 (SKA3)
spindle and kinetochore associated complex subunit 3 		ENST00000298260 (SKA3-005) 21153595-21176548 nonsense_mediated_decay
ENST00000314759 (SKA3-001) 21153595-21176602 protein_coding
ENST00000400018 (SKA3-006) 21153595-21176547 protein_coding
ENST00000462482 (SKA3-002) 21154697-21176551 nonsense_mediated_decay
ENST00000465471 (SKA3-007) 21161790-21176551 nonsense_mediated_decay
ENST00000475251 (SKA3-003) 21172269-21176473 retained_intron
ENST00000536239 (SKA3-004) 21168222-21172713 retained_intron
CIL_0003SS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021963-ENSMUSG00000021965 CGP 10090 14:57798180-57826163
GeneTranscriptPositionBiotype
ENSMUSG00000021965 (Ska3)
spindle and kinetochore associated complex subunit 3 		ENSMUST00000022536 (Ska3-201) 57806561-57826163 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SS_0001ENSG00000150459ENST00000382533ENST00000450573ENST00000467636ENST00000471009ENST00000485646ENST00000492245ENST00000607003ENST00000621421ENSG00000165480ENST00000298260ENST00000314759ENST00000400018ENST00000462482ENST00000465471ENST00000475251ENST00000536239CIL_0003SS_0002ENSMUSG00000021965ENSMUST00000022536
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003SS_0001ENSG00000150459ENST00000382533ENST00000450573ENST00000467636ENST00000492245ENST00000607003ENST00000621421ENSG00000165480ENST00000298260ENST00000314759ENST00000400018ENST00000462482ENST00000465471ENST00000475251ENST00000536239CIL_0003SS_0002ENSMUSG00000021965ENSMUST00000022536
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150459 ENST00000382533 N/A N/A 10.344±0.00 13.656±0.00 7.827±0.00 9.693±0.00 6.737±0.70 3.927±0.00 5.862±0.00 10.895±0.64 10.644±4.62 16.881±10.33 4.011±0.00 34.786±0.00
ENST00000450573 53.848±0.00 68.002±0.00 25.765±0.00 35.540±0.00 46.465±10.08 74.461±41.05 42.600±14.78 46.672±28.19 42.620±4.21 47.921±16.98 54.052±25.30 75.467±27.15 46.481±2.68 87.451±20.94
ENST00000467636 N/A N/A N/A 17.773±0.00 N/A N/A 13.534±0.00 N/A 9.510±0.00 9.676±0.00 N/A 15.993±0.00 28.364±0.00 N/A
ENST00000471009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492245 N/A 45.768±0.00 N/A N/A N/A N/A 33.031±0.00 42.592±14.71 32.094±0.00 37.436±0.00 42.430±10.75 64.445±0.00 55.500±0.00 98.780±0.00
ENST00000607003 5.304±0.00 N/A N/A 10.261±0.00 4.529±0.00 N/A 9.333±0.00 N/A N/A N/A 5.237±0.00 12.485±3.02 12.092±2.41 N/A
ENST00000621421 N/A N/A N/A N/A N/A N/A N/A N/A 14.765±0.00 N/A N/A N/A N/A N/A
ENSG00000165480 ENST00000298260 N/A 0.127±0.00 N/A 0.036±0.00 N/A 0.090±0.00 N/A N/A 0.019±0.00 N/A N/A 2.686±1.82 0.700±0.10 3.224±0.00
ENST00000314759 N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A 1.827±0.80 1.128±0.00 1.553±0.92
ENST00000400018 N/A N/A 0.094±0.00 0.020±0.00 0.235±0.00 N/A 0.049±0.00 0.031±0.00 0.053±0.00 0.019±0.00 0.013±0.00 2.078±0.00 0.289±0.13 N/A
ENST00000462482 0.075±0.00 N/A N/A 0.126±0.00 0.257±0.00 N/A N/A 0.039±0.00 N/A N/A N/A 14.507±0.00 1.742±0.00 6.889±0.00
ENST00000465471 0.097±0.00 0.217±0.00 N/A 0.247±0.17 0.202±0.14 N/A 0.089±0.00 0.056±0.00 0.256±0.00 N/A N/A 2.150±0.00 N/A N/A
ENST00000475251 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536239 N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021965 ENSMUST00000022536 0.397±0.28 0.246±0.14 0.243±0.03 1.475±1.04 0.277±0.16 0.807±0.16 0.074±0.03 0.079±0.04 3.636±3.67 0.131±0.03 0.060±0.02 1.152±0.39 3.859±2.61 0.929±0.33

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