C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ADP-ribosylation factor-like 6 interacting protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315580 ARL6IP4-001 ENSG00000182196 9606 + 12:122980060-122982909 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000315580
Transcript ID Bladder
ENST00000315580 2.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_00006P CIL_00006P_0002 CGP 12:122865328-122981649
CIL_0002PC CIL_0002PC_0001 CGP 12:122920951-122981649
CIL_0002P6 CIL_0002P6_0001 CGP 12:122974580-122982913
CIL_0002P7 CIL_0002P7_0001 CGP 12:122980060-123150015

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145667 Arl6ip4-004 protein_coding Mus_musculus 0 536
ENSMUST00000031351 Arl6ip4-001 protein_coding Mus_musculus 0 514
ENSMUST00000122394 Arl6ip4-003 protein_coding Mus_musculus 0 505

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