C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SWAP switching B-cell complex 70kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318950 SWAP70-001 ENSG00000133789 9606 + 11:9664077-9752991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318950 18.139±0.00 10.896±0.00 2.091±0.00 2.094±0.72 7.039±1.24 10.277±7.02 2.942±1.90 6.134±0.00 2.690±2.24 9.576±3.84 2.832±0.00 5.303±1.29 11.676±1.15 4.637±2.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CP CIL_0009CP_0001 VISTA 11:9311967-9915183
CIL_0004J5 CIL_0004J5_0001 CGP 11:9573681-9752991
CIL_0004J8 CIL_0004J8_0001 CGP 11:9664077-10294207

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016444 IEA somatic cell DNA recombination
GO:0042995 IEA cell projection
GO:0045190 IEA isotype switching

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033325 Swap70-201 protein_coding Mus_musculus 0 2254

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