C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein, X-linked-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321792 RBMXL1-001 ENSG00000213516 9606 - 1:88979456-88992772 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321792
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321792 2.864±0.00 2.262±0.95 1.235±0.00 2.785±0.30 1.073±0.00 2.239±0.46 2.043±1.56 2.370±1.35 1.041±0.03 2.285±0.96 1.697±0.54 1.123±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114726 Rbmx-002 protein_coding Mus_musculus 0 2041
ENSMUST00000114730 Rbmx-005 protein_coding Mus_musculus 0 2039
ENSMUST00000049245 Rbmxl1-201 protein_coding Mus_musculus 0 1748
ENSMUST00000143310 Rbmx-003 protein_coding Mus_musculus 0 1500
ENSMUST00000094051 Gm7324-001 processed_pseudogene Mus_musculus 0 1485
ENSMUST00000098470 Rbmx-004 protein_coding Mus_musculus 0 1245
ENSMUST00000140384 Rbmx-001 nonsense_mediated_decay Mus_musculus 0 1149
ENSMUST00000133346 Rbmx-006 protein_coding Mus_musculus 0 418

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