C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLIS family zinc finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000324333 GLIS3-003 ENSG00000107249 9606 - 9:3824127-4152183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverOvaryPlacentaTestisENST00000324333
Transcript ID Adrenal Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000324333 0.894±0.00 0.492±0.07 0.227±0.13 0.132±0.00 0.983±0.84 0.225±0.10 1.367±0.88 0.275±0.00 0.984±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0001 CGP 9:3824127-4587469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0005634 ISS nucleus
GO:0005794 IDA Golgi apparatus
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162022 Glis3-001 protein_coding Mus_musculus 0 2451
ENSMUST00000161026 Glis3-007 retained_intron Mus_musculus 0 2418
ENSMUST00000065113 Glis3-003 nonsense_mediated_decay Mus_musculus 0 2100
ENSMUST00000112612 Glis3-002 protein_coding Mus_musculus 0 1559
ENSMUST00000159520 Glis3-008 processed_transcript Mus_musculus 0 900
ENSMUST00000162873 Glis3-009 processed_transcript Mus_musculus 0 835
ENSMUST00000159178 Glis3-006 protein_coding Mus_musculus 0 455
ENSMUST00000161328 Glis3-005 protein_coding Mus_musculus 0 455

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