C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dickkopf WNT signaling pathway inhibitor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326932 DKK3-001 ENSG00000050165 9606 - 11:11963106-12009370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326932
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326932 3.610±0.00 5.863±0.00 139.310±116.71 6.327±5.06 17.170±16.31 32.072±30.92 8.918±8.66 1.432±0.00 12.096±8.58 3.415±0.00 22.292±16.28 23.231±2.93 22.168±12.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HU CIL_0001HU_0002 CGP 11:11841423-12009769
CIL_0008T3 CIL_0008T3_0001 VISTA 11:11882278-12483702
CIL_0008YS CIL_0008YS_0001 VISTA 11:11899653-12500760
CIL_0007SQ CIL_0007SQ_0001 VISTA 11:11959946-12561868
CIL_0004J2 CIL_0004J2_0001 CGP 11:11963106-12263789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005615 TAS extracellular space
GO:0007275 IEA multicellular organismal development
GO:0009653 TAS anatomical structure morphogenesis
GO:0016055 IEA Wnt signaling pathway
GO:0030178 IEA negative regulation of Wnt signaling pathway
GO:0030325 IEP adrenal gland development
GO:0032348 IDA negative regulation of aldosterone biosynthetic process
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:2000065 IDA negative regulation of cortisol biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033036 Dkk3-201 protein_coding Mus_musculus 0 1059
ENSDART00000111046 dkk3a-201 protein_coding Danio_rerio 0.000001 60

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