C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piezo-type mechanosensitive ion channel component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000327397 PIEZO1-201 ENSG00000103335 9606 - 16:88715491-88717611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverENST00000327397
Transcript ID Colon Kidney Liver
ENST00000327397 20.394±0.00 17.577±0.00 5.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0001 VISTA 16:88690989-89294615
CIL_0000Y8 CIL_0000Y8_0002 CGP 16:88696495-88715386
CIL_0000Y5 CIL_0000Y5_0002 CGP 16:88706463-88785211
CIL_00057I CIL_00057I_0002 CGP 16:88715343-88809258

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008381 IEA mechanically-gated ion channel activity
GO:0016021 IEA integral component of membrane
GO:0034220 IEA ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067252 Piezo1-201 protein_coding Mus_musculus 0 833
ENSMUST00000128383 Piezo1-001 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000156333 Piezo1-003 protein_coding Mus_musculus 0 833
ENSMUST00000126553 Piezo1-007 retained_intron Mus_musculus 0 307
ENSDART00000113688 PIEZO2 (1 of 4)-201 protein_coding Danio_rerio 0 279
ENSDART00000153654 PIEZO2 (1 of 4)-001 protein_coding Danio_rerio 0 279
ENSMUST00000134304 Piezo1-006 retained_intron Mus_musculus 0 265
ENSMUST00000151855 Ctu2-002 nonsense_mediated_decay Mus_musculus 0 254
ENSMUST00000123671 Piezo1-008 retained_intron Mus_musculus 0 254
ENSMUST00000116412 Ctu2-001 protein_coding Mus_musculus 6e-21 106

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