C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329321 GPR39-001 ENSG00000183840 9606 + 2:132416574-132646559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyLiverLungOvaryPlacentaTestisENST00000329321
Transcript ID Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000329321 0.080±0.01 0.770±0.20 0.453±0.31 0.443±0.00 1.941±0.58 0.063±0.01 0.994±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0001 CGP 2:132416574-132671579

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027581 Gpr39-001 protein_coding Mus_musculus 0 1308
ENSMUST00000027582 Lypd1-002 protein_coding Mus_musculus 0 544
ENSMUST00000162899 Lypd1-003 protein_coding Mus_musculus 0 544
ENSMUST00000159417 Lypd1-001 protein_coding Mus_musculus 0 544
ENSMUST00000159529 Lypd1-004 protein_coding Mus_musculus 0 313

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