C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000330503 DDX41-004 ENSG00000183258 9606 - 5:177511577-177516916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000330503
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000330503 18.656±0.00 15.151±0.00 15.207±13.88 7.307±6.17 8.019±6.51 3.099±2.91 10.528±8.80 7.516±5.49 6.010±4.54 13.465±0.00 17.298±12.14 31.498±4.08 25.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0000XC CIL_0000XC_0002 CGP 5:177501907-177517469
CIL_0002YP CIL_0002YP_0001 CGP 5:177511577-177554541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021956 Ddx41-201 protein_coding Mus_musculus 0 2346

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