C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INO80 complex subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334598 INO80C-001 ENSG00000153391 9606 - 18:35468333-35497991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334598
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334598 3.351±0.00 1.561±0.00 2.871±0.00 4.314±0.00 2.612±2.25 1.654±1.52 1.730±1.49 1.685±0.00 6.815±1.48 15.600±5.64 7.725±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FM CIL_0002FM_0002 CGP 18:35452230-35711834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IDA nucleolus
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0031011 IEA:IDA Ino80 complex
GO:0071339 IDA MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153360 Ino80c-001 protein_coding Mus_musculus 0 795
ENSMUST00000125169 Ino80c-003 protein_coding Mus_musculus 0 643
ENSMUST00000055012 Ino80c-004 protein_coding Mus_musculus 0 518

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