C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337211 PCGF6-003 ENSG00000156374 9606 - 10:103302796-103351079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000337211
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000337211 0.372±0.00 0.602±0.00 0.991±0.33 0.586±0.00 0.747±0.00 0.656±0.00 0.851±0.00 1.804±0.00 2.563±0.00 0.990±0.72 4.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HJ CIL_0001HJ_0002 CGP 10:103277163-103351134
CIL_00065U CIL_00065U_0001 CGP 10:103302796-103389065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0031519 IDA PcG protein complex
GO:0035102 IDA PRC1 complex
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026032 Pcgf6-201 protein_coding Mus_musculus 0 488

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