C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338969 TRIM9-002 ENSG00000100505 9606 - 14:50978778-51095329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungMusclePlacentaENST00000338969
Transcript ID Adrenal Breast Lung Muscle Placenta
ENST00000338969 0.027±0.00 0.106±0.00 0.051±0.00 0.060±0.00 0.075±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0002 CGP 14:50975262-51257546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0042803 IPI protein homodimerization activity
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167755 Trim9-203 protein_coding Mus_musculus 0 2200
ENSMUST00000110520 Trim9-201 protein_coding Mus_musculus 0 2200
ENSMUST00000110522 Trim9-202 protein_coding Mus_musculus 0 2200

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