C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIO kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339486 RIOK3-001 ENSG00000101782 9606 + 18:23452823-23483140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339486
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339486 7.514±0.00 4.706±0.00 3.763±1.52 3.389±2.54 7.239±4.09 4.992±3.57 5.313±2.85 4.453±3.37 6.190±3.23 9.541±7.16 4.741±1.89 8.936±3.35 6.483±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FI CIL_0002FI_0002 CGP 18:23197144-23486603
CIL_0005WY CIL_0005WY_0001 CGP 18:23452823-23531807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0007059 TAS chromosome segregation
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025270 Riok3-201 protein_coding Mus_musculus 0 2067
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00007 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00007 55

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