C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 1 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339569 MSL1-006 ENSG00000188895 9606 + 17:40131001-40136787 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLungOvaryENST00000339569
Transcript ID Adipose Adrenal Bladder Brain Breast Lung Ovary
ENST00000339569 3.439±0.00 2.532±0.00 1.083±0.00 3.385±0.00 1.422±0.00 2.467±0.00 2.800±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GG CIL_0002GG_0001 CGP 17:40092787-40136916
CIL_0007GO CIL_0007GO_0001 CGP 17:40122298-40172183

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037915 Msl1-001 protein_coding Mus_musculus 0 874
ENSMUST00000037930 Msl1-003 protein_coding Mus_musculus 0 785
ENSMUST00000107487 Msl1-002 protein_coding Mus_musculus 0 785
ENSMUST00000141016 Msl1-006 processed_transcript Mus_musculus 0 593
ENSMUST00000126969 Msl1-005 protein_coding Mus_musculus 0 287

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