C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341148 RBM33-001 ENSG00000184863 9606 + 7:155746586-155781485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLiverLungOvaryPlacentaENST00000341148
Transcript ID Adrenal Breast Heart Kidney Liver Lung Ovary Placenta
ENST00000341148 3.486±0.00 2.371±0.00 0.576±0.00 1.751±0.00 0.564±0.00 3.575±0.00 3.298±1.09 0.240±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0001 VISTA 7:155171352-155773114
CIL_000962 CIL_000962_0001 VISTA 7:155454922-156056094
CIL_0006DB CIL_0006DB_0002 CGP 7:155474206-155781485
CIL_0006DC CIL_0006DC_0002 CGP 7:155644451-155812273

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059644 Rbm33-201 protein_coding Mus_musculus 0 898
ENSMUST00000114884 Rbm33-003 protein_coding Mus_musculus 0 898
ENSMUST00000133313 Rbm33-004 protein_coding Mus_musculus 3e-35 156

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