C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000343743 NPM1P14-001 ENSG00000182965 9606 + 7:112520488-112521670 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartLungOvaryTestisENST00000343743
Transcript ID Adipose Adrenal Colon Heart Lung Ovary Testis
ENST00000343743 0.025±0.00 0.013±0.00 0.026±0.00 0.012±0.00 0.131±0.11 0.015±0.00 0.011±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 730
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 713
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000109354 Npm1-002 protein_coding Mus_musculus 0 588
ENSMUST00000101375 Npm1-003 protein_coding Mus_musculus 0 586
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 512
ENSMUST00000118047 Gm14681-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000141881 Npm1-004 processed_transcript Mus_musculus 9e-33 145

Loading