C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: syntaxin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344271 STX2-003 ENSG00000111450 9606 - 12:130801254-130827250 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000344271
Transcript ID Testis
ENST00000344271 12.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042T CIL_00042T_0001 CGP 12:130396137-130839266
CIL_000430 CIL_000430_0001 CGP 12:130789600-130877678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141492 Stx2-004 processed_transcript Mus_musculus 0 361
ENSMUST00000151712 Stx2-003 retained_intron Mus_musculus 0 361
ENSMUST00000100680 Stx2-002 protein_coding Mus_musculus 0 361
ENSMUST00000031378 Stx2-001 protein_coding Mus_musculus 0 361

Loading