C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 72kDa pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344851 SRP72P2-001 ENSG00000188451 9606 - 6:158237336-158242797 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344851
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344851 0.012±0.00 0.123±0.00 0.202±0.00 0.163±0.14 0.154±0.12 0.496±0.00 0.094±0.07 0.049±0.00 0.033±0.00 0.186±0.18 0.207±0.00 0.483±0.68 0.020±0.00 0.051±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W3 CIL_0004W3_0001 CGP 6:158168352-158511828
CIL_0002QL CIL_0002QL_0002 CGP 6:158232236-158635428

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101087 Srp72-001 protein_coding Mus_musculus 0 1962
ENSMUST00000120550 Srp72-002 protein_coding Mus_musculus 0 1210
ENSMUST00000141873 Srp72-003 retained_intron Mus_musculus 0 693
ENSMUST00000150661 Srp72-005 retained_intron Mus_musculus 0 484
ENSMUST00000125732 Srp72-007 retained_intron Mus_musculus 0 285

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