C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B-cell CLL/lymphoma 11B (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345514 BCL11B-002 ENSG00000127152 9606 - 14:99169287-99271485 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungOvaryENST00000345514
Transcript ID Brain Breast Colon Liver Lung Ovary
ENST00000345514 0.484±0.00 0.267±0.00 1.768±0.00 0.631±0.00 0.405±0.00 0.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KT CIL_0007KT_0001 UCNEbase 14:98137606-99417500
CIL_00080U CIL_00080U_0001 VISTA 14:98699863-99300807
CIL_0005H1 CIL_0005H1_0001 CGP 14:99169287-99480879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109891 Bcl11b-003 protein_coding Mus_musculus 0 3042
ENSMUST00000066060 Bcl11b-001 protein_coding Mus_musculus 0 2383
ENSMUST00000109887 Bcl11b-002 protein_coding Mus_musculus 0 2377
ENSDART00000097543 BCL11B (2 of 2)-201 protein_coding Danio_rerio 0 357
ENSMUST00000084564 Zfp629-001 protein_coding Mus_musculus 0.00001 58
ENSMUST00000122066 Zfp629-002 protein_coding Mus_musculus 0.00001 58
ENSMUST00000058038 Zfp629-003 protein_coding Mus_musculus 0.00001 58
ENSMUST00000057717 Zfp319-201 protein_coding Mus_musculus 0.00001 58

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