C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 8 (androgen-induced)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346714 FGF8-003 ENSG00000107831 9606 - 10:101770324-101775974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryTestisENST00000346714
Transcript ID Brain Kidney Ovary Testis
ENST00000346714 0.332±0.00 0.063±0.00 0.406±0.00 0.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089J CIL_00089J_0001 VISTA 10:101185253-101786853
CIL_000942 CIL_000942_0001 VISTA 10:101206892-101808215
CIL_00099F CIL_00099F_0001 VISTA 10:101467436-102068636
CIL_00099E CIL_00099E_0001 VISTA 10:101480423-102081273
CIL_0005N9 CIL_0005N9_0001 CGP 10:101610664-101780369
CIL_0005NC CIL_0005NC_0001 CGP 10:101770130-101783413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IEP metanephros development
GO:0001823 IEP mesonephros development
GO:0003148 ISS outflow tract septum morphogenesis
GO:0003198 ISS epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0005104 IEA fibroblast growth factor receptor binding
GO:0005105 IDA type 1 fibroblast growth factor receptor binding
GO:0005111 IDA type 2 fibroblast growth factor receptor binding
GO:0005576 TAS extracellular region
GO:0005615 IDA extracellular space
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007369 NAS gastrulation
GO:0008083 IEA growth factor activity
GO:0008284 IDA positive regulation of cell proliferation
GO:0008286 TAS insulin receptor signaling pathway
GO:0008406 IMP gonad development
GO:0008543 IGI fibroblast growth factor receptor signaling pathway
GO:0009653 NAS anatomical structure morphogenesis
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0042476 IEP odontogenesis
GO:0045087 TAS innate immune response
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048015 TAS phosphatidylinositol-mediated signaling
GO:0051781 IEA positive regulation of cell division
GO:0055026 IMP negative regulation of cardiac muscle tissue development
GO:0060348 IMP bone development
GO:0060563 IDA neuroepithelial cell differentiation
GO:0071542 IDA dopaminergic neuron differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111927 Fgf8-003 protein_coding Mus_musculus 0 1044
ENSMUST00000111924 Fgf8-005 protein_coding Mus_musculus 0 859
ENSMUST00000111928 Fgf8-002 protein_coding Mus_musculus 0 852
ENSMUST00000026240 Fgf8-001 protein_coding Mus_musculus 0 852
ENSMUST00000111925 Fgf8-006 protein_coding Mus_musculus 0 848
ENSMUST00000026241 Fgf8-004 protein_coding Mus_musculus 0 846

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