C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005NC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107831-ENSG00000107833 CGP 9606 10:101770130-101783413
GeneTranscriptPositionBiotype
ENSG00000107833 (NPM3)
nucleophosmin/nucleoplasmin 3
ENST00000370110 (NPM3-001) 101781325-101783413 protein_coding
ENST00000462391 (NPM3-004) 101781589-101783375 processed_transcript
ENST00000468544 (NPM3-003) 101781727-101782648 processed_transcript
ENST00000474993 (NPM3-002) 101781332-101783384 processed_transcript
CIL_0005NC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025219-ENSMUSG00000056209 CGP 10090 19:45736798-45749591
GeneTranscriptPositionBiotype
ENSMUSG00000025219 (Fgf8)
fibroblast growth factor 8
ENSMUST00000026240 (Fgf8-001) 45736798-45742874 protein_coding
ENSMUST00000026241 (Fgf8-004) 45736818-45742873 protein_coding
ENSMUST00000111924 (Fgf8-005) 45736971-45742684 protein_coding
ENSMUST00000111925 (Fgf8-006) 45736990-45742684 protein_coding
ENSMUST00000111927 (Fgf8-003) 45736936-45742858 protein_coding
ENSMUST00000111928 (Fgf8-002) 45736813-45742915 protein_coding
ENSMUSG00000056209 (Npm3)
nucleoplasmin 3
ENSMUST00000070215 (Npm3-001) 45747734-45749591 protein_coding
ENSMUST00000144165 (Npm3-002) 45748543-45749549 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NC_0001ENSG00000107833ENST00000370110ENST00000462391ENST00000468544ENST00000474993CIL_0005NC_0002ENSMUSG00000025219ENSMUST00000026240ENSMUST00000026241ENSMUST00000111924ENSMUST00000111925ENSMUST00000111927ENSMUST00000111928ENSMUSG00000056209ENSMUST00000070215ENSMUST00000144165
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005NC_0001ENSG00000107833ENST00000370110ENST00000462391ENST00000468544ENST00000474993CIL_0005NC_0002ENSMUSG00000025219ENSMUST00000026240ENSMUST00000026241ENSMUST00000111924ENSMUST00000111925ENSMUST00000111927ENSMUST00000111928ENSMUSG00000056209ENSMUST00000070215ENSMUST00000144165
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107833 ENST00000370110 1.538±0.00 2.032±0.00 N/A 3.282±0.00 2.407±0.60 2.221±0.00 1.105±0.72 1.554±0.00 1.344±0.43 1.219±0.02 N/A 22.388±7.55 15.804±4.99 5.796±3.81
ENST00000462391 7.279±0.00 5.549±0.00 N/A 3.384±0.00 4.465±0.00 7.948±0.00 0.261±0.00 9.173±0.00 1.796±0.00 4.917±0.00 N/A N/A N/A 16.684±0.00
ENST00000468544 5.110±0.00 12.860±0.00 0.576±0.00 4.774±0.00 3.380±0.00 5.774±0.00 1.107±0.00 5.837±2.65 4.126±0.05 12.336±0.00 3.938±3.19 16.673±12.24 10.074±2.49 10.657±2.26
ENST00000474993 N/A N/A 0.593±0.00 1.163±0.17 1.330±0.00 1.685±0.00 N/A 1.060±0.46 N/A 2.193±0.00 1.097±0.44 11.017±0.00 4.717±0.00 6.207±2.93
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025219 ENSMUST00000026240 N/A N/A 0.009±0.00 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A 0.478±0.10 N/A 0.166±0.00
ENSMUST00000026241 N/A 0.062±0.00 N/A 0.063±0.00 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.262±0.14
ENSMUST00000111924 N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A 0.050±0.02 N/A N/A 1.050±0.50 0.066±0.02 0.372±0.08
ENSMUST00000111925 N/A N/A N/A 0.168±0.01 N/A N/A N/A N/A N/A N/A N/A 0.832±0.29 N/A 0.211±0.03
ENSMUST00000111927 N/A N/A N/A 0.128±0.03 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.479±0.22 N/A 0.175±0.04
ENSMUST00000111928 N/A N/A N/A 0.215±0.13 N/A N/A 0.029±0.00 N/A 0.019±0.00 N/A N/A 0.755±0.26 0.055±0.00 0.283±0.12
ENSMUSG00000056209 ENSMUST00000070215 20.265±8.63 24.466±5.28 31.118±2.64 N/A 25.280±10.57 28.407±6.99 11.812±0.78 18.327±1.33 34.948±24.55 20.384±2.08 12.958±1.56 31.514±3.87 49.436±6.87 90.216±8.43
ENSMUST00000144165 N/A 5.437±0.97 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.650±0.00 N/A 41.517±5.88

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