C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle associated 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347703 CDCA7-002 ENSG00000144354 9606 + 2:173354820-173368904 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000347703
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000347703 0.294±0.00 0.502±0.00 0.280±0.00 0.477±0.00 0.559±0.00 0.162±0.00 0.012±0.00 0.374±0.00 14.138±7.11 2.083±1.19 3.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JV CIL_0008JV_0001 VISTA 2:172949643-173551205
CIL_0004KE CIL_0004KE_0001 CGP 2:173075435-173368997
CIL_0007OE CIL_0007OE_0001 UCNEbase 2:173198009-174351945
CIL_0004JD CIL_0004JD_0001 CGP 2:173354820-173965702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0042127 IDA regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102691 Cdca7-001 protein_coding Mus_musculus 0 885
ENSMUST00000127344 Cdca7-004 processed_transcript Mus_musculus 0 243
ENSMUST00000157019 Cdca7-005 protein_coding Mus_musculus 1.96182e-44 185

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