C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348075 PTPRS-202 ENSG00000105426 9606 - 19:5205508-5340803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000348075
Transcript ID Adipose Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000348075 11.827±0.00 3.412±0.00 2.540±1.97 1.965±0.47 2.098±0.41 6.645±5.85 1.604±0.00 4.059±2.66 0.655±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ON CIL_0005ON_0001 CGP 19:4969113-5340803
CIL_0005OM CIL_0005OM_0001 CGP 19:5158495-5456856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0030198 TAS extracellular matrix organization
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067538 Ptprs-001 protein_coding Mus_musculus 0 6359
ENSMUST00000086828 Ptprs-002 protein_coding Mus_musculus 0 3044
ENSMUST00000143018 Ptprs-003 processed_transcript Mus_musculus 0 2141
ENSDART00000083308 ptprsa-201 protein_coding Danio_rerio 0 1712
ENSDART00000145114 ptprsa-001 protein_coding Danio_rerio 0 1712

Loading