C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348403 STRBP-001 ENSG00000165209 9606 - 9:123124709-123268564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348403
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348403 1.525±0.00 3.664±0.00 4.850±0.00 2.236±0.00 5.221±0.00 1.421±0.00 5.778±0.00 1.767±0.00 1.732±0.00 0.542±0.00 3.417±0.28 1.685±0.06 17.214±6.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072186 Strbp-001 protein_coding Mus_musculus 0 4338
ENSMUST00000028279 Strbp-201 protein_coding Mus_musculus 0 4337
ENSMUST00000183690 Strbp-003 nonsense_mediated_decay Mus_musculus 0 3081
ENSMUST00000135488 Strbp-002 processed_transcript Mus_musculus 0 952
ENSMUST00000145808 Strbp-006 protein_coding Mus_musculus 0 893
ENSMUST00000155237 Strbp-005 protein_coding Mus_musculus 0 745
ENSMUST00000144206 Strbp-004 processed_transcript Mus_musculus 1.96182e-44 185

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