C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155237 Strbp-005 ENSMUSG00000026915 10090 - 2:37640855-37703859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000155237
Transcript ID Testis
ENSMUST00000155237 61.471±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WQ CIL_0006WQ_0002 CGP 2:37432168-37566454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003725 IDA double-stranded RNA binding
GO:0003727 IDA single-stranded RNA binding
GO:0006928 IMP cellular component movement
GO:0007286 IMP spermatid development
GO:0007638 IMP mechanosensory behavior
GO:0015630 IDA microtubule cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348403 STRBP-001 protein_coding Homo_sapiens 0 745
ENST00000360998 STRBP-003 protein_coding Homo_sapiens 0 558
ENST00000407982 STRBP-002 nonsense_mediated_decay Homo_sapiens 0 701
ENST00000447404 STRBP-201 protein_coding Homo_sapiens 0 747
ENST00000479114 STRBP-007 protein_coding Homo_sapiens 0 497

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