C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 7-like 2 (T-cell specific, HMG-box)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000349937 TCF7L2-004 ENSG00000148737 9606 + 10:112950452-113146103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000349937
Transcript ID Bladder
ENST00000349937 1.744±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OU CIL_0006OU_0001 CGP 10:112446998-113167678
CIL_0007PE CIL_0007PE_0001 UCNEbase 10:112490627-113337047
CIL_0006OX CIL_0006OX_0001 CGP 10:112950250-113589602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008013 IEA beta-catenin binding
GO:0060070 IEA canonical Wnt signaling pathway
GO:2001237 IEA negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111654 Tcf7l2-011 protein_coding Mus_musculus 0 1585
ENSMUST00000111658 Tcf7l2-001 protein_coding Mus_musculus 0 1581
ENSMUST00000111652 Tcf7l2-003 protein_coding Mus_musculus 0 1352
ENSMUST00000153888 Tcf7l2-005 protein_coding Mus_musculus 0 1044
ENSMUST00000111662 Tcf7l2-203 protein_coding Mus_musculus 0 924
ENSMUST00000061496 Tcf7l2-201 protein_coding Mus_musculus 0 924
ENSMUST00000111657 Tcf7l2-202 protein_coding Mus_musculus 0 924
ENSMUST00000041717 Tcf7l2-012 protein_coding Mus_musculus 0 924
ENSMUST00000111659 Tcf7l2-009 protein_coding Mus_musculus 0 911
ENSMUST00000111653 Tcf7l2-010 protein_coding Mus_musculus 0 684
ENSMUST00000126434 Tcf7l2-013 retained_intron Mus_musculus 0 684
ENSMUST00000111651 Tcf7l2-004 protein_coding Mus_musculus 0 684
ENSMUST00000111649 Tcf7l2-002 protein_coding Mus_musculus 0 684
ENSMUST00000111656 Tcf7l2-006 protein_coding Mus_musculus 0 617
ENSMUST00000127233 Tcf7l2-008 protein_coding Mus_musculus 0 569
ENSMUST00000133008 Tcf7l2-014 retained_intron Mus_musculus 0 433
ENSMUST00000148666 Tcf7l2-015 protein_coding Mus_musculus 0 379
ENSMUST00000111646 Tcf7l2-007 protein_coding Mus_musculus 0 379
ENSMUST00000142291 Tcf7l2-018 protein_coding Mus_musculus 0 379
ENSMUST00000145249 Tcf7l2-019 processed_transcript Mus_musculus 0 379
ENSDART00000125046 tcf7l2-008 protein_coding Danio_rerio 0 377
ENSDART00000031408 tcf7l2-009 protein_coding Danio_rerio 0 377
ENSDART00000005562 tcf7l2-007 protein_coding Danio_rerio 0 377
ENSDART00000122972 tcf7l2-006 protein_coding Danio_rerio 0 377
ENSDART00000009237 tcf7l2-002 protein_coding Danio_rerio 0 377
ENSDART00000153068 tcf7l2-001 protein_coding Danio_rerio 0 377
ENSMUST00000143334 Tcf7l2-016 processed_transcript Mus_musculus 0 375
ENSMUST00000127653 Tcf7l2-017 processed_transcript Mus_musculus 0 370
ENSDART00000121527 tcf7l2-201 protein_coding Danio_rerio 0 370
ENSDART00000128703 tcf7l2-003 processed_transcript Danio_rerio 0 318

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