C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151532-ENSG00000148737 CGP 9606 10:112446998-113167678
GeneTranscriptPositionBiotype
ENSG00000148737 (TCF7L2)
transcription factor 7-like 2 (T-cell specific, HMG-box) 		ENST00000277945 (TCF7L2-010) 113146072-113165632 protein_coding
ENST00000346198 (TCF7L2-002) 112950916-113141316 protein_coding
ENST00000349937 (TCF7L2-004) 112950452-113146103 protein_coding
ENST00000352065 (TCF7L2-201) 112950250-113167678 protein_coding
ENST00000355717 (TCF7L2-202) 112950250-113167678 protein_coding
ENST00000355995 (TCF7L2-203) 112950250-113167678 protein_coding
ENST00000369386 (TCF7L2-006) 113151083-113166324 protein_coding
ENST00000369389 (TCF7L2-007) 113143920-113165656 protein_coding
ENST00000369395 (TCF7L2-001) 112950672-113146103 protein_coding
ENST00000369397 (TCF7L2-003) 112950452-113167678 protein_coding
ENST00000466338 (TCF7L2-011) 113151771-113166309 processed_transcript
ENST00000470254 (TCF7L2-013) 113151831-113165940 nonsense_mediated_decay
ENST00000471569 (TCF7L2-005) 113157773-113165587 processed_transcript
ENST00000476887 (TCF7L2-009) 113158037-113166160 processed_transcript
ENST00000480888 (TCF7L2-008) 113152414-113165961 processed_transcript
ENST00000494353 (TCF7L2-012) 113161231-113165681 processed_transcript
ENST00000534894 (TCF7L2-204) 112950250-113167678 protein_coding
ENST00000536810 (TCF7L2-205) 112950250-113167678 protein_coding
ENST00000538897 (TCF7L2-206) 112950250-113167678 protein_coding
ENST00000542695 (TCF7L2-207) 112950250-113167678 protein_coding
ENST00000543371 (TCF7L2-208) 112950250-113167678 protein_coding
ENST00000545257 (TCF7L2-209) 112950250-113167678 protein_coding
ENSG00000151532 (VTI1A)
vesicle transport through interaction with t-SNAREs 1A 		ENST00000393077 (VTI1A-001) 112447258-112818744 protein_coding
ENST00000432306 (VTI1A-009) 112447258-112737784 protein_coding
ENST00000472892 (VTI1A-003) 112446999-112449659 processed_transcript
ENST00000480057 (VTI1A-006) 112447359-112527405 processed_transcript
ENST00000483122 (VTI1A-002) 112446998-112450726 processed_transcript
ENST00000489142 (VTI1A-005) 112447234-112485291 processed_transcript
ENST00000489357 (VTI1A-007) 112447349-112538301 processed_transcript
ENST00000494728 (VTI1A-004) 112447276-112464758 processed_transcript
ENST00000496445 (VTI1A-008) 112447264-112538646 processed_transcript
ENSG00000225292 (RP11-57H14.3)
 ENST00000428766 (RP11-57H14.3-001) 112888735-112906111 sense_intronic
ENSG00000227560 (RP11-139K1.2)
 ENST00000420976 (RP11-139K1.2-001) 112987476-112987865 processed_pseudogene
ENSG00000233340 (RP11-25C19.3)
 ENST00000443652 (RP11-25C19.3-001) 112671812-112677819 antisense
ENSG00000233547 (RP11-57H14.2)
 ENST00000369391 (RP11-57H14.2-001) 112950646-112951875 antisense
ENSG00000234017 (RP11-214N15.5)
 ENST00000430685 (RP11-214N15.5-001) 112548632-112548872 processed_pseudogene
ENSG00000260917 (RP11-57H14.4)
 ENST00000564352 (RP11-57H14.4-001) 112823490-112827726 sense_overlapping
ENSG00000264763 (MIR4295)
microRNA 4295 		ENST00000585286 (MIR4295-201) 112634170-112634254 miRNA
ENSG00000279315 (RP11-57H14.5)
 ENST00000624062 (RP11-57H14.5-001) 112831169-112832454 TEC
CIL_0006OU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024983-ENSMUSG00000024985 CGP 10090 19:55316351-55933654
GeneTranscriptPositionBiotype
ENSMUSG00000024983 (Vti1a)
vesicle transport through interaction with t-SNAREs 1A 		ENSMUST00000095950 (Vti1a-201) 55316351-55626561 protein_coding
ENSMUSG00000024985 (Tcf7l2)
transcription factor 7 like 2, T cell specific, HMG box 		ENSMUST00000041717 (Tcf7l2-012) 55741820-55933252 protein_coding
ENSMUST00000061496 (Tcf7l2-201) 55741810-55933654 protein_coding
ENSMUST00000111646 (Tcf7l2-007) 55895510-55933229 protein_coding
ENSMUST00000111649 (Tcf7l2-002) 55742243-55912722 protein_coding
ENSMUST00000111651 (Tcf7l2-004) 55742243-55912723 protein_coding
ENSMUST00000111652 (Tcf7l2-003) 55742242-55912723 protein_coding
ENSMUST00000111653 (Tcf7l2-010) 55742269-55925236 protein_coding
ENSMUST00000111654 (Tcf7l2-011) 55741884-55925239 protein_coding
ENSMUST00000111656 (Tcf7l2-006) 55742332-55933654 protein_coding
ENSMUST00000111657 (Tcf7l2-202) 55741810-55933654 protein_coding
ENSMUST00000111658 (Tcf7l2-001) 55741884-55932715 protein_coding
ENSMUST00000111659 (Tcf7l2-009) 55742058-55932209 protein_coding
ENSMUST00000111662 (Tcf7l2-203) 55741820-55933229 protein_coding
ENSMUST00000126434 (Tcf7l2-013) 55742269-55910549 retained_intron
ENSMUST00000127233 (Tcf7l2-008) 55742364-55933231 protein_coding
ENSMUST00000127653 (Tcf7l2-017) 55895662-55912637 processed_transcript
ENSMUST00000133008 (Tcf7l2-014) 55742845-55910681 retained_intron
ENSMUST00000142291 (Tcf7l2-018) 55894534-55918966 protein_coding
ENSMUST00000143334 (Tcf7l2-016) 55898309-55919041 processed_transcript
ENSMUST00000145249 (Tcf7l2-019) 55893352-55919618 processed_transcript
ENSMUST00000148666 (Tcf7l2-015) 55898553-55919604 protein_coding
ENSMUST00000153888 (Tcf7l2-005) 55742468-55932209 protein_coding
ENSMUSG00000097632 (4930552P12Rik)
RIKEN cDNA 4930552P12 gene 		ENSMUST00000181198 (4930552P12Rik-201) 55640589-55702204 lincRNA
ENSMUSG00000099746 (RP24-210C4.1)
per-pentamer repeat gene 		ENSMUST00000190974 (RP24-210C4.1-001) 55841672-55845897 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OU_0001ENSG00000148737ENST00000277945ENST00000349937ENST00000352065ENST00000355995ENST00000369389ENST00000369397ENST00000466338ENST00000471569ENST00000536810ENST00000538897ENST00000543371ENST00000545257ENSG00000151532ENST00000393077ENST00000432306ENST00000483122ENST00000489357ENST00000496445ENSG00000225292ENST00000428766ENSG00000227560ENST00000420976ENSG00000233340ENST00000443652ENSG00000233547ENST00000369391ENSG00000234017ENST00000430685ENSG00000260917ENST00000564352ENSG00000264763ENST00000585286ENSG00000279315ENST00000624062CIL_0006OU_0002ENSMUSG00000024983ENSMUST00000095950ENSMUSG00000024985ENSMUST00000041717ENSMUST00000061496ENSMUST00000111646ENSMUST00000111656ENSMUST00000111657ENSMUST00000111658ENSMUST00000111659ENSMUST00000111662ENSMUST00000127233ENSMUST00000145249ENSMUST00000153888ENSMUSG00000097632ENSMUST00000181198ENSMUSG00000099746ENSMUST00000190974
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148737 ENST00000277945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.012±0.00 N/A N/A
ENST00000346198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000349937 N/A N/A 1.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000352065 N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355995 N/A N/A N/A N/A N/A N/A 1.323±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000369386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369389 N/A N/A 4.991±0.00 N/A N/A N/A N/A N/A 3.133±0.00 N/A 1.127±0.00 N/A N/A 1.776±0.00
ENST00000369395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369397 12.773±0.00 2.981±0.00 N/A 2.839±0.00 7.548±0.00 10.156±0.00 N/A N/A 1.501±0.00 N/A N/A 5.702±0.75 3.162±1.28 12.591±0.00
ENST00000466338 N/A N/A N/A N/A 2.674±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.489±0.00 N/A N/A N/A
ENST00000476887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536810 N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 N/A N/A N/A N/A N/A N/A
ENST00000538897 4.654±0.00 N/A 0.841±0.00 N/A 0.628±0.00 N/A N/A N/A N/A N/A N/A 2.031±0.00 2.658±1.23 N/A
ENST00000542695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543371 N/A N/A N/A N/A 1.460±0.00 1.340±0.00 N/A N/A 1.578±1.08 1.253±0.00 N/A 2.786±0.60 4.434±2.32 N/A
ENST00000545257 N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A 1.143±0.00 N/A 0.674±0.00
ENSG00000151532 ENST00000393077 3.813±0.00 2.757±0.00 1.484±0.00 2.410±0.07 3.806±0.36 2.557±0.60 1.818±0.49 3.015±1.59 2.271±0.94 2.333±0.13 1.582±0.62 2.424±1.00 2.332±0.17 2.949±0.30
ENST00000432306 N/A N/A 2.247±0.00 N/A N/A N/A 1.254±0.00 N/A N/A 1.868±0.00 N/A 2.001±0.00 N/A N/A
ENST00000472892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483122 N/A 1.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.400±0.77 N/A N/A
ENST00000489142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489357 N/A N/A N/A 7.389±0.00 N/A N/A N/A 3.013±0.00 N/A N/A 1.674±0.00 8.490±0.00 7.403±0.00 14.212±0.00
ENST00000494728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496445 N/A N/A N/A N/A 6.563±0.00 5.051±0.00 N/A N/A N/A 4.390±0.00 N/A 5.225±0.00 N/A N/A
ENSG00000225292 ENST00000428766 0.975±0.00 1.888±0.00 N/A 1.019±0.00 0.149±0.00 0.380±0.09 0.501±0.12 N/A 0.486±0.00 0.530±0.00 0.928±0.00 0.334±0.00 N/A 0.450±0.25
ENSG00000227560 ENST00000420976 0.188±0.00 0.373±0.00 1.760±0.00 0.553±0.00 2.768±2.56 6.437±0.00 N/A 0.875±0.00 1.522±0.00 2.072±0.00 0.179±0.00 0.847±0.79 0.665±0.28 0.167±0.02
ENSG00000233340 ENST00000443652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.232±0.00 0.196±0.00
ENSG00000233547 ENST00000369391 N/A N/A N/A N/A 7.329±0.00 N/A N/A N/A N/A N/A N/A 8.393±0.00 N/A N/A
ENSG00000234017 ENST00000430685 4.348±0.00 4.545±0.00 N/A 1.703±0.00 2.846±0.00 3.950±0.00 0.417±0.00 2.610±0.00 1.636±0.93 2.288±0.00 1.080±0.00 5.476±5.22 N/A 2.737±0.00
ENSG00000260917 ENST00000564352 0.635±0.00 1.557±0.00 0.599±0.00 1.826±0.94 1.070±0.81 0.744±0.32 0.883±0.72 1.482±1.15 0.478±0.01 0.479±0.10 0.844±0.18 0.819±0.41 0.385±0.25 0.994±0.19
ENSG00000264763 ENST00000585286 N/A N/A N/A N/A N/A N/A N/A N/A 0.895±0.00 N/A N/A N/A N/A N/A
ENSG00000279315 ENST00000624062 N/A 0.023±0.00 0.101±0.00 0.028±0.00 0.430±0.39 0.148±0.00 0.076±0.00 N/A 0.050±0.00 0.287±0.00 0.887±0.00 0.050±0.02 0.036±0.00 0.071±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024983 ENSMUST00000095950 4.491±0.75 5.035±0.46 6.348±1.30 8.951±4.08 4.411±0.81 3.559±0.56 2.215±0.44 4.015±1.23 3.131±1.80 4.392±1.82 3.975±0.34 5.119±1.23 5.000±1.26 1.255±0.71
ENSMUSG00000024985 ENSMUST00000041717 2.102±0.42 N/A 2.042±0.70 N/A 2.452±0.68 8.551±1.90 1.355±0.83 2.070±0.68 1.542±0.48 3.119±0.56 0.296±0.00 3.294±0.91 1.071±0.55 0.985±0.54
ENSMUST00000061496 2.003±0.17 0.812±0.00 3.614±0.75 14.527±5.41 2.066±0.68 6.568±1.70 0.754±0.00 1.198±0.15 1.261±0.31 2.033±0.48 0.276±0.13 1.564±0.28 1.922±0.86 0.990±0.31
ENSMUST00000111646 N/A N/A N/A 31.149±22.83 3.016±0.00 N/A N/A N/A 2.123±0.00 N/A N/A 1.384±0.00 0.472±0.00 N/A
ENSMUST00000111649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111656 N/A N/A N/A 19.914±14.58 N/A N/A N/A N/A 1.762±0.18 N/A 0.364±0.14 N/A N/A N/A
ENSMUST00000111657 N/A N/A 1.528±0.00 N/A N/A N/A 0.821±0.17 N/A 3.680±0.00 N/A 0.242±0.08 N/A 1.073±0.21 N/A
ENSMUST00000111658 N/A 1.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111659 1.503±0.00 2.095±0.30 N/A N/A 3.224±0.66 N/A N/A N/A N/A N/A N/A 3.048±0.91 N/A N/A
ENSMUST00000111662 N/A N/A N/A N/A 1.538±0.00 N/A N/A N/A N/A N/A N/A 1.752±0.78 N/A N/A
ENSMUST00000126434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127233 N/A 1.697±0.17 N/A 0.746±0.00 N/A N/A N/A 1.863±0.32 N/A N/A 0.369±0.00 N/A N/A N/A
ENSMUST00000127653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.667±0.00
ENSMUST00000148666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153888 4.411±0.76 5.033±0.55 2.063±0.00 N/A 7.419±0.80 25.891±4.43 1.551±0.47 3.719±0.91 2.851±0.84 5.466±1.46 N/A 9.758±4.45 1.763±0.37 1.162±0.14
ENSMUSG00000097632 ENSMUST00000181198 0.037±0.02 0.068±0.04 0.070±0.00 0.060±0.00 0.071±0.03 0.131±0.06 0.148±0.08 0.017±0.01 0.036±0.02 0.031±0.01 0.235±0.05 0.101±0.07 0.034±0.02 0.411±0.18
ENSMUSG00000099746 ENSMUST00000190974 0.112±0.06 0.069±0.03 0.109±0.06 0.267±0.21 0.160±0.06 0.452±0.16 0.094±0.03 0.126±0.03 0.125±0.11 0.253±0.08 N/A 0.511±0.39 0.089±0.10 0.059±0.03

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