C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 7-like 2 (T-cell specific, HMG-box)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000005562 tcf7l2-007 ENSDARG00000004415 7955 - 12:32668787-32790288 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000005562
Transcript ID Brain
ENSDART00000005562 9.525±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IBA chromatin binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005667 IBA transcription factor complex
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0007420 IBA brain development
GO:0008013 IBA beta-catenin binding
GO:0016055 IEA Wnt receptor signaling pathway
GO:0043565 IBA sequence-specific DNA binding
GO:0044212 IBA transcription regulatory region DNA binding
GO:0044333 IMP Wnt receptor signaling pathway involved in digestive tract morphogenesis
GO:0048699 IBA generation of neurons
GO:0060070 IMP canonical Wnt receptor signaling pathway
GO:0060729 IMP intestinal epithelial structure maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041717 Tcf7l2-012 protein_coding Mus_musculus 0 1085
ENSMUST00000061496 Tcf7l2-201 protein_coding Mus_musculus 0 1125
ENSMUST00000111646 Tcf7l2-007 protein_coding Mus_musculus 0 728
ENSMUST00000111649 Tcf7l2-002 protein_coding Mus_musculus 0 767
ENSMUST00000111651 Tcf7l2-004 protein_coding Mus_musculus 0 459
ENSMUST00000111652 Tcf7l2-003 protein_coding Mus_musculus 0 368
ENSMUST00000111653 Tcf7l2-010 protein_coding Mus_musculus 0 1147
ENSMUST00000111654 Tcf7l2-011 protein_coding Mus_musculus 0 643
ENSMUST00000111656 Tcf7l2-006 protein_coding Mus_musculus 0 1186
ENSMUST00000111657 Tcf7l2-202 protein_coding Mus_musculus 0 1182
ENSMUST00000111658 Tcf7l2-001 protein_coding Mus_musculus 0 671
ENSMUST00000111659 Tcf7l2-009 protein_coding Mus_musculus 0 1147
ENSMUST00000111662 Tcf7l2-203 protein_coding Mus_musculus 0 1085
ENSMUST00000126434 Tcf7l2-013 retained_intron Mus_musculus 0 562
ENSMUST00000127233 Tcf7l2-008 protein_coding Mus_musculus 0 1040
ENSMUST00000127653 Tcf7l2-017 processed_transcript Mus_musculus 0 303
ENSMUST00000133008 Tcf7l2-014 retained_intron Mus_musculus 0 420
ENSMUST00000142291 Tcf7l2-018 protein_coding Mus_musculus 0 399
ENSMUST00000143334 Tcf7l2-016 processed_transcript Mus_musculus 0 532
ENSMUST00000145249 Tcf7l2-019 processed_transcript Mus_musculus 0 582
ENSMUST00000148666 Tcf7l2-015 protein_coding Mus_musculus 0 569
ENSMUST00000153888 Tcf7l2-005 protein_coding Mus_musculus 0 721
ENST00000346198 TCF7L2-002 protein_coding Homo_sapiens 0 215
ENST00000349937 TCF7L2-004 protein_coding Homo_sapiens 0 377
ENST00000352065 TCF7L2-201 protein_coding Homo_sapiens 0 1218
ENST00000355717 TCF7L2-202 protein_coding Homo_sapiens 0 634
ENST00000355995 TCF7L2-203 protein_coding Homo_sapiens 0 841
ENST00000369389 TCF7L2-007 protein_coding Homo_sapiens 0 505
ENST00000369395 TCF7L2-001 protein_coding Homo_sapiens 0 466
ENST00000369397 TCF7L2-003 protein_coding Homo_sapiens 0 1214
ENST00000534894 TCF7L2-204 protein_coding Homo_sapiens 0 634
ENST00000536810 TCF7L2-205 protein_coding Homo_sapiens 0 1098
ENST00000538897 TCF7L2-206 protein_coding Homo_sapiens 0 784
ENST00000542695 TCF7L2-207 protein_coding Homo_sapiens 0 466
ENST00000543371 TCF7L2-208 protein_coding Homo_sapiens 0 787
ENST00000545257 TCF7L2-209 protein_coding Homo_sapiens 0 1284

Loading