C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 2, apoptosis-related cysteine peptidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350623 CASP2-003 ENSG00000106144 9606 + 7:143288451-143305071 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverMuscleOvaryENST00000350623
Transcript ID Brain Breast Liver Muscle Ovary
ENST00000350623 0.514±0.00 1.626±0.00 0.935±0.00 0.947±0.00 1.959±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VH CIL_0006VH_0001 CGP 7:143279957-143307696
CIL_0006VM CIL_0006VM_0001 CGP 7:143288215-143352083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042981 IEA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031895 Casp2-001 protein_coding Mus_musculus 0 990
ENSMUST00000156829 Casp2-003 nonsense_mediated_decay Mus_musculus 0 566
ENSMUST00000132246 Casp2-005 processed_transcript Mus_musculus 0 307
ENSMUST00000141669 Casp2-006 processed_transcript Mus_musculus 0 237
ENSMUST00000144821 Casp2-007 processed_transcript Mus_musculus 0 230
ENSMUST00000139930 Casp2-004 retained_intron Mus_musculus 6e-31 139

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