C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000353284 PTPRS-203 ENSG00000105426 9606 - 19:5205508-5340803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000353284
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000353284 4.861±0.00 5.833±0.00 11.835±5.97 8.091±0.00 5.199±0.00 0.944±0.00 6.396±0.00 0.740±0.00 6.039±4.96 1.676±1.35 7.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ON CIL_0005ON_0001 CGP 19:4969113-5340803
CIL_0005OM CIL_0005OM_0001 CGP 19:5158495-5456856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086828 Ptprs-002 protein_coding Mus_musculus 0 5049
ENSMUST00000067538 Ptprs-001 protein_coding Mus_musculus 0 3044
ENSMUST00000143018 Ptprs-003 processed_transcript Mus_musculus 0 2010
ENSDART00000083308 ptprsa-201 protein_coding Danio_rerio 0 1712
ENSDART00000145114 ptprsa-001 protein_coding Danio_rerio 0 1712

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