C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354308 SYT5-001 ENSG00000129990 9606 - 19:55171223-55180441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000354308
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000354308 0.144±0.00 0.172±0.00 2.136±0.00 0.122±0.00 0.253±0.00 0.046±0.00 0.126±0.00 0.024±0.00 0.088±0.00 0.042±0.00 0.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OX CIL_0003OX_0001 CGP 19:55158661-55180441
CIL_0004TB CIL_0004TB_0001 CGP 19:55171199-55209506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0005768 IEA endosome
GO:0006112 TAS energy reserve metabolic process
GO:0007268 TAS synaptic transmission
GO:0008021 IEA synaptic vesicle
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017156 IEA calcium ion-dependent exocytosis
GO:0019905 IEA syntaxin binding
GO:0030054 IEA cell junction
GO:0030276 IEA clathrin binding
GO:0031045 IEA dense core granule
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050796 TAS regulation of insulin secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000065957 Syt5-201 protein_coding Mus_musculus 0 1242

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