C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA1598
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355371 KIAA1598-202 ENSG00000187164 9606 - 10:116883377-117005577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonLiverLungOvaryPlacentaTestisENST00000355371
Transcript ID Adrenal Bladder Colon Liver Lung Ovary Placenta Testis
ENST00000355371 0.304±0.00 0.563±0.00 0.499±0.20 0.526±0.04 0.948±0.00 3.315±3.48 2.132±1.83 5.033±3.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GX CIL_0004GX_0002 CGP 10:116671192-116911788
CIL_0007YJ CIL_0007YJ_0001 VISTA 10:116794613-117395732
CIL_0007ZF CIL_0007ZF_0001 VISTA 10:116796186-117397238
CIL_0004H0 CIL_0004H0_0002 CGP 10:116849512-117126586
CIL_0002OL CIL_0002OL_0001 CGP 10:116881482-117138301

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0007010 IEA cytoskeleton organization
GO:0007411 TAS axon guidance
GO:0019900 IEA kinase binding
GO:0044295 IEA axonal growth cone
GO:2000114 IEA regulation of establishment of cell polarity
GO:2001222 IEA regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047511 4930506M07Rik-201 protein_coding Mus_musculus 0 2466
ENSMUST00000163821 4930506M07Rik-202 protein_coding Mus_musculus 0 1781

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