C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KH domain containing, RNA binding, signal transduction associated 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355849 KHDRBS3-001 ENSG00000131773 9606 + 8:135457457-135647610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355849 2.670±0.00 1.752±0.00 1.415±0.00 10.679±1.25 1.393±0.42 3.116±2.25 1.684±1.22 6.625±5.98 3.802±1.03 2.755±0.00 6.050±3.53 3.044±1.97 1.095±0.44 37.387±8.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PU CIL_0004PU_0001 CGP 8:134477788-135656722
CIL_0004PR CIL_0004PR_0001 CGP 8:135457457-138496822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IDA:IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 TAS spermatogenesis
GO:0017124 IEA SH3 domain binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022954 Khdrbs3-201 protein_coding Mus_musculus 0 2058

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