C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinoid X receptor, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356384 RXRA-001 ENSG00000186350 9606 + 9:134371971-134440585 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000151 CIL_000151_0001 CGP 9:134135365-134440585
CIL_000152 CIL_000152_0001 CGP 9:134317098-134844843

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113934 Rxra-003 protein_coding Mus_musculus 0 1628
ENSMUST00000166775 Rxra-201 protein_coding Mus_musculus 0 1626
ENSMUST00000100251 Rxra-002 protein_coding Mus_musculus 0 1626
ENSMUST00000077257 Rxra-001 protein_coding Mus_musculus 0 1626
ENSMUST00000148756 Rxra-005 processed_transcript Mus_musculus 0 508
ENSDART00000009755 rxrba-201 protein_coding Danio_rerio 0 464
ENSDART00000112245 rxrba-202 protein_coding Danio_rerio 0 464
ENSDART00000102075 rxrba-004 protein_coding Danio_rerio 0 464
ENSDART00000136528 rxrba-003 protein_coding Danio_rerio 0 464
ENSDART00000132887 rxrba-005 protein_coding Danio_rerio 0 241
ENSDART00000147429 rxrba-007 protein_coding Danio_rerio 0 239
ENSDART00000124173 rxraa-201 protein_coding Danio_rerio 0.00000005 66

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