C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357162 VPS13B-001 ENSG00000132549 9606 + 8:99013266-99877580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357162
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357162 1.016±0.00 1.131±0.00 1.047±0.32 0.935±0.42 0.877±0.02 1.686±0.64 2.690±2.34 1.703±1.05 0.405±0.00 0.737±0.23 0.531±0.21 1.613±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0001 CGP 8:98944403-99877580
CIL_00090P CIL_00090P_0001 VISTA 8:98972229-99575594
CIL_0006JN CIL_0006JN_0001 CGP 8:99013266-99894062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048646 Vps13b-201 protein_coding Mus_musculus 0 13290
ENSMUST00000155638 Cox6c-005 nonsense_mediated_decay Mus_musculus 0 320

Loading