C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 13 homolog B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358544 VPS13B-002 ENSG00000132549 9606 + 8:99013266-99877580 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLungMuscleOvaryTestisENST00000358544
Transcript ID Adipose Brain Colon Heart Lung Muscle Ovary Testis
ENST00000358544 0.309±0.00 1.366±0.00 0.437±0.00 0.276±0.00 0.850±0.00 0.400±0.00 1.050±0.50 0.945±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026G CIL_00026G_0001 CGP 8:98944403-99877580
CIL_00090P CIL_00090P_0001 VISTA 8:98972229-99575594
CIL_0006JN CIL_0006JN_0001 CGP 8:99013266-99894062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048646 Vps13b-201 protein_coding Mus_musculus 0 8436
ENSMUST00000155638 Cox6c-005 nonsense_mediated_decay Mus_musculus 0 320

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