C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: intraflagellar transport 172
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359466 IFT172-004 ENSG00000138002 9606 - 2:27471687-27489773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartENST00000359466
Transcript ID Breast Heart
ENST00000359466 1.822±0.00 1.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012H CIL_00012H_0001 CGP 2:27427790-27446481
CIL_0001DG CIL_0001DG_0001 CGP 2:27442366-27489789
CIL_00010D CIL_00010D_0001 CGP 2:27444371-27495245

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005929 ISS cilium
GO:0005930 IBA axoneme
GO:0030992 IBA intraciliary transport particle B
GO:0031982 IDA vesicle
GO:0036064 IBA ciliary basal body
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041565 Ift172-201 protein_coding Mus_musculus 0 2097
ENSMUST00000147797 Nol9-003 processed_transcript Mus_musculus 0.00001 57
ENSMUST00000146544 Golga2-011 processed_transcript Mus_musculus 0.0001 53

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