C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359617 STX16-018 ENSG00000124222 9606 + 20:58651283-58679500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000359617
Transcript ID Placenta
ENST00000359617 5.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000697 CIL_000697_0002 CGP 20:58459101-58679526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005484 IDA SNAP receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 TAS cytoplasm
GO:0005925 IDA focal adhesion
GO:0006886 IEA intracellular protein transport
GO:0006891 IEA intra-Golgi vesicle-mediated transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031201 IEA:TAS SNARE complex
GO:0042147 IDA retrograde transport, endosome to Golgi
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087908 Stx16-001 protein_coding Mus_musculus 0 1018
ENSMUST00000044638 Stx16-201 protein_coding Mus_musculus 0 987
ENSMUST00000156054 Stx16-005 protein_coding Mus_musculus 0 719
ENSMUST00000147038 Stx16-003 protein_coding Mus_musculus 0 712
ENSMUST00000134876 Stx16-002 protein_coding Mus_musculus 0 196

Loading