C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 3, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359889 FAM3A-001 ENSG00000071889 9606 - X:154506159-154516236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000359889
Transcript ID Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000359889 1.218±0.00 0.231±0.00 0.350±0.00 1.152±0.00 8.051±0.00 6.554±0.00 10.274±0.00 7.574±3.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LG CIL_0003LG_0001 CGP X:154487306-154516242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114142 Fam3a-006 protein_coding Mus_musculus 0 828
ENSMUST00000114143 Fam3a-001 protein_coding Mus_musculus 0 813
ENSMUST00000015427 Fam3a-007 protein_coding Mus_musculus 0 806
ENSMUST00000114141 Fam3a-008 protein_coding Mus_musculus 0 736
ENSMUST00000122894 Fam3a-002 protein_coding Mus_musculus 0 708
ENSMUST00000114139 Fam3a-010 protein_coding Mus_musculus 0 654
ENSMUST00000114138 Fam3a-005 protein_coding Mus_musculus 0 401
ENSMUST00000149218 Fam3a-011 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000136716 Fam3a-003 retained_intron Mus_musculus 0 226
ENSMUST00000141604 Fam3a-004 nonsense_mediated_decay Mus_musculus 1.4013e-45 189

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