C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: family with sequence similarity 3, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114141 Fam3a-008 ENSMUSG00000031399 10090 - X:74385204-74393182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000114141
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000114141 1.669±0.00 9.231±0.00 5.623±0.68 0.769±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LG CIL_0003LG_0002 CGP X:74369217-74393272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322269 FAM3A-201 protein_coding Homo_sapiens 0 564
ENST00000359889 FAM3A-001 protein_coding Homo_sapiens 0 736
ENST00000369641 FAM3A-012 protein_coding Homo_sapiens 0 817
ENST00000369643 FAM3A-003 protein_coding Homo_sapiens 0 710
ENST00000393572 FAM3A-017 protein_coding Homo_sapiens 0 564
ENST00000412894 FAM3A-009 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000416319 FAM3A-008 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000419205 FAM3A-202 protein_coding Homo_sapiens 0 398
ENST00000421517 FAM3A-016 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000426266 FAM3A-020 protein_coding Homo_sapiens 0 520
ENST00000433619 FAM3A-014 nonsense_mediated_decay Homo_sapiens 4e-35 152
ENST00000434658 FAM3A-011 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000440318 FAM3A-013 nonsense_mediated_decay Homo_sapiens 9.94922e-44 180
ENST00000447601 FAM3A-004 protein_coding Homo_sapiens 0 713
ENST00000449971 FAM3A-007 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000457212 FAM3A-006 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000475657 FAM3A-010 retained_intron Homo_sapiens 0 274
ENST00000492763 FAM3A-015 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000497506 FAM3A-019 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000612856 FAM3A-005 retained_intron Homo_sapiens 0 542
ENST00000621967 FAM3A-002 nonsense_mediated_decay Homo_sapiens 0 564

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