C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360392 TRIM9-003 ENSG00000100505 9606 - 14:50996064-51095076 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000360392
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000360392 0.053±0.00 0.122±0.00 6.188±0.03 0.381±0.00 0.425±0.36 0.039±0.01 0.151±0.00 0.191±0.08 0.076±0.00 0.069±0.04 0.086±0.00 0.225±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0002 CGP 14:50975262-51257546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0042803 IPI protein homodimerization activity
GO:0043161 IDA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110520 Trim9-201 protein_coding Mus_musculus 0 2237
ENSMUST00000167755 Trim9-203 protein_coding Mus_musculus 0 2235
ENSMUST00000110522 Trim9-202 protein_coding Mus_musculus 0 2235

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