C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatid perinuclear RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360998 STRBP-003 ENSG00000165209 9606 - 9:123125039-123268576 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonPlacentaTestisENST00000360998
Transcript ID Adipose Breast Colon Placenta Testis
ENST00000360998 0.666±0.00 0.795±0.01 2.599±0.00 0.944±0.00 14.084±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028279 Strbp-201 protein_coding Mus_musculus 0 3818
ENSMUST00000072186 Strbp-001 protein_coding Mus_musculus 0 3818
ENSMUST00000183690 Strbp-003 nonsense_mediated_decay Mus_musculus 0 2933
ENSMUST00000135488 Strbp-002 processed_transcript Mus_musculus 0 767
ENSMUST00000145808 Strbp-006 protein_coding Mus_musculus 0 706
ENSMUST00000155237 Strbp-005 protein_coding Mus_musculus 0 558
ENSMUST00000144206 Strbp-004 processed_transcript Mus_musculus 3.00018e-42 178

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