C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thrombospondin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366787 THBS2-001 ENSG00000186340 9606 - 6:169215780-169254044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366787
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366787 27.975±0.00 8.564±0.00 0.339±0.00 4.912±3.71 7.438±0.15 11.498±10.58 2.379±1.57 2.087±0.00 2.309±0.00 4.633±3.39 1.104±0.00 20.466±15.14 1.019±0.50 4.334±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W0 CIL_0004W0_0001 CGP 6:168441151-169254044
CIL_0004W1 CIL_0004W1_0001 CGP 6:169215780-169702048

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS:IEA extracellular region
GO:0005604 IEA basement membrane
GO:0007155 IEA cell adhesion
GO:0008201 IEA heparin binding
GO:0016525 IDA negative regulation of angiogenesis
GO:0031012 IEA extracellular matrix
GO:0031091 IDA platelet alpha granule
GO:0051965 IEA positive regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170872 Thbs2-201 protein_coding Mus_musculus 0 3596

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